Update ids in aedes_main table manually

Usage

aedes_flytable_update(
  update.serial_ids = FALSE,
  update_dups = TRUE,
  dry_run = FALSE
)

update.serial_ids: Whether to update the serial_id column uniquely defining each row. This is off by default as the serial_id is auto-incremented by the server.
update_dups: Whether to update rows with "duplicate" status (now the default) and also set the root_duplicated column.
dry_run: Whether to show what would happen rather than doing it.

This is now part of the scripted updates on flyem but even in future it may occasionally be useful to trigger this manually.

Expert use only: there is a scheduled job that updates root IDs on FlyTable every 30 minutes, so this function should normally not be needed.

The root_duplicated column will only be ticked for root_ids when there is more than one entry after setting aside any rows with status=duplicate.