Package index
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choose_dyak_dataset() - Switch the default dataset for
dyak_*functions -
dyak_body_annotations() - Return neurojson body annotations via the Clio interface
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dyak_connection_table() - Connectivity query for yakuba neurons
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dyak_ids() - Get yakuba ids in standard formats
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dyak_islatest() - Check if a bodyid still exists in the specified yakuba DVID node
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dyak_lr_position() - Calculate the left-right position wrt to the symmetrised yakuba midline
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dyak_neuprint() - Login to yakuba neuprint server
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dyak_neuprint_meta() - Fetch neuprint metadata for yakuba neurons
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dyak_xyz2bodyid() - Map XYZ locations to bodyids for the yakuba dataset
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mirror_dyak()symmetric_dyak() - Mirror yakuba neurons or points to the opposite side of the VNC
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read_dyak_neurons() - Read neuronal skeletons via neuprint
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with_dyak()choose_dyak() - Evaluate an expression after temporarily setting malevnc options
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xform_dyak2manc() - Transform yakuba neurons or points to MANC space (or back)
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yakuba_annotate_body() - Set Clio body annotations
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yakuba_neuropil_shellyakuba_vnc_shell - Neuropil and VNC surface meshes for the yakuba VNC
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yakuba_register_xforms() - Register yakuba and MANC TPS transforms
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yakubasym - Symmetric yakuba VNC template