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Query CRANT tables in the CAVE annotation system

Source: R/cave-tables.R
crant_cave_query.Rd

Query CRANT tables in the CAVE annotation system

Usage

crant_cave_query(table, live = TRUE, ...)

Arguments

table

The name of the table (or view, see views section) to query

live

Whether to use live query mode, which updates any root ids to their current value (or to another timestamp when provided). Values of TRUE or 1 select CAVE's Live mode, while 2 selects Live live mode which gives access even to annotations that are not part of a materialisation version. See section Live and Live Live queries for details.

...

Additional arguments passed to flywire_cave_query flywire_cave_query

Value

A data.frame

See also

flywire_cave_query

Examples

if (FALSE) { # \dontrun{
library(dplyr)
cell_info=crant_cave_query('cell_info')
cell_info %>%
  filter(tag2=='anterior-posterior projection pattern') %>%
  count(tag)

# Another way to query a specific table
crant_backbone_proofread <- with_crant(bancr:::get_cave_table_data("cell_info"))
} # }