Return metadata about Aedes neurons from FlyTable

Usage

aedes_meta(
  ids = NULL,
  ignore.case = FALSE,
  fixed = FALSE,
  version = NULL,
  timestamp = NULL,
  unique = FALSE,
  ...
)

aedes_ids(
  ids,
  ignore.case = FALSE,
  fixed = FALSE,
  unique = FALSE,
  version = NULL,
  timestamp = NULL,
  ...
)

Arguments

ids: Root IDs (character/int64) or a query string like "class:ALPN".
ignore.case: For query strings, whether to ignore case.
fixed: For query strings, whether to treat queries as fixed strings rather than regular expressions (default FALSE).
version: Optional CAVE materialisation version.
timestamp: Optional CAVE timestamp.
unique: Whether to drop duplicate root_id rows (with duplicates attached as an attribute).
...: Additional arguments passed to fafbseg::cam_meta() (e.g. cache controls such as expiry, refresh).

Value

For aedes_meta(), a data.frame of metadata. For aedes_ids(), a vector of root IDs.

Details

When version or timestamp are specified, root ids in the returned data frame will be mapped to the corresponding timepoint using the supervoxel_id column. When no version/timestamp is specified then ids will be simply as returned by the flytable (which updates them every half hour). If you want to be sure that ids match the most up to date state of the segmentation possible then you can ask for timestamp='now'.

Examples

if (FALSE) { # \dontrun{
aedes_meta("class:ALPN")
aedes_ids("class:ALPN")

aedes_ids("class:ALPN", timestamp='now')
aedes_ids("class:ALPN", version='latest')
} # }